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5JQM

Crystal Structure of Phosphatidic acid Transporter Ups1/Mdm35 Void of Bound Phospholipid from Saccharomyces Cerevisiae at 1.5 Angstroms Resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2013-12-11
DetectorADSC QUANTUM 315
Wavelength(s)0.9791
Spacegroup nameC 1 2 1
Unit cell lengths118.563, 68.290, 105.137
Unit cell angles90.00, 102.10, 90.00
Refinement procedure
Resolution29.560 - 1.500
R-factor0.1656
Rwork0.164
R-free0.20240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jql
RMSD bond length0.007
RMSD bond angle1.059
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.8_1069)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.530
High resolution limit [Å]1.5004.0701.500
Rmerge0.0840.0700.420
Rmeas0.100
Rpim0.052
Total number of observations465057
Number of reflections129446
<I/σ(I)>16.2
Completeness [%]98.692.488.9
Redundancy3.63.53.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP52898% Tacsimate, pH5.0, 20% PEG 3350, 200mM Sodium thiocyanate

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