5JJZ
Chromo domain of human Chromodomain Protein, Y-Like 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-11-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97912 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 57.962, 57.962, 98.824 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.010 - 2.000 |
R-factor | 0.2315 |
Rwork | 0.230 |
R-free | 0.26010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hae |
RMSD bond length | 0.011 |
RMSD bond angle | 1.393 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP (11.0.05) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 5.430 | 2.000 |
Rmerge | 0.051 | 0.030 | 0.845 |
Total number of observations | 153213 | ||
Number of reflections | 7130 | ||
<I/σ(I)> | 15.5 | ||
Completeness [%] | 99.6 | 95.7 | 98.8 |
Redundancy | 21.5 | 17.4 | 16.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 20% PEG 3350, 0.2 M K/Na tartrate |