Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JEV

del-[Ru(phen)2(dppz]2+ bound to d(TCGGCGCCGA) with Cobalt hexammine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2012-12-14
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.8266
Spacegroup nameP 41 21 2
Unit cell lengths48.720, 48.720, 29.960
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution18.901 - 0.990
R-factor0.1242
Rwork0.123
R-free0.14100
Structure solution methodSAD
RMSD bond length0.013
RMSD bond angle2.325
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELXDE
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]22.6101.020
High resolution limit [Å]0.9900.990
Rmerge0.0310.833
Number of reflections19226
<I/σ(I)>19.91.9
Completeness [%]94.192.2
Redundancy6.56.7
CC(1/2)1.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52911uL 2mM d(TCGGCGCCGA), 1uL 2mM del-[Ru(phen)2(dppz)]2+, 6uL of a solution containing 10% (V/V) 2-methyl-2,4-pentanediol, 40mM Na-cacodylate, 20mM Cobalt hexammine, 12mM NaCl and 80mM KCl.

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon