5JE4
Crystal structure of Burkholderia glumae ToxA Y7A mutant with bound S-adenosylhomocysteine (SAH)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-10-21 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.97918 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 46.515, 66.622, 145.056 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.100 - 1.932 |
| R-factor | 0.1703 |
| Rwork | 0.168 |
| R-free | 0.22670 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | Burkholderia glumae ToxA Y7A mutant with bound SAH |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.794 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.10-2155-000)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.100 | 2.000 |
| High resolution limit [Å] | 1.930 | 1.930 |
| Rmerge | 0.099 | 0.495 |
| Number of reflections | 32710 | |
| <I/σ(I)> | 13.7 | 4.2 |
| Completeness [%] | 94.5 | 97.5 |
| Redundancy | 5.5 | 5.5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | 18 - 23% polyethylene glycol monomethyl ether 2000, 100 mM Tris, pH 6.1 - 6.8, 6 mM SAH, and 1 mM toxoflavin |






