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5JE3

Crystal structure of Burkholderia glumae ToxA Y7A mutant with bound S-adenosylhomocysteine (SAH)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2011-10-21
DetectorADSC QUANTUM 315
Wavelength(s)0.97918
Spacegroup nameP 21 21 21
Unit cell lengths47.071, 67.265, 144.757
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.694 - 1.792
R-factor0.1678
Rwork0.166
R-free0.21110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Burkholderia glumae ToxA with bound SAH and 1 6-didemethyltoxoflavin
RMSD bond length0.008
RMSD bond angle0.924
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10-2155-000))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.7001.870
High resolution limit [Å]1.7901.790
Rmerge0.0590.520
Number of reflections43376
<I/σ(I)>16.63.3
Completeness [%]99.999.7
Redundancy4.63.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29518 - 23% polyethylene glycol monomethyl ether 2000, 100 mM Tris, pH 6.1 - 6.8, and 6 mM SAH

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