5JDY
Crystal structure of Burkholderia glumae ToxA Y7F mutant with bound S-adenosylhomocysteine (SAH) and toxoflavin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CHESS BEAMLINE A1 |
| Synchrotron site | CHESS |
| Beamline | A1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-11-20 |
| Detector | ADSC QUANTUM 210 |
| Wavelength(s) | 0.97670 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 45.185, 71.170, 78.151 |
| Unit cell angles | 90.00, 100.75, 90.00 |
Refinement procedure
| Resolution | 19.764 - 1.770 |
| R-factor | 0.15 |
| Rwork | 0.148 |
| R-free | 0.19400 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | Burkholderia glumae ToxA Y7F mutant with bound SAH |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.923 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.10-2155-000)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 19.800 | 1.830 |
| High resolution limit [Å] | 1.770 | 1.770 |
| Rmerge | 0.063 | 0.164 |
| Number of reflections | 46227 | |
| <I/σ(I)> | 14.4 | 4.7 |
| Completeness [%] | 97.2 | 92.3 |
| Redundancy | 2.8 | 2.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | 18 - 23% polyethylene glycol monomethyl ether 2000, 100 mM Tris, pH 6.1 - 6.8, 6 mM SAH, and 1 mM toxoflavin |






