5JDR
Structure of PD-L1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-24 |
Detector | MARRESEARCH |
Wavelength(s) | 0.9791 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 72.240, 91.510, 141.830 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 70.920 - 2.700 |
R-factor | 0.22998 |
Rwork | 0.227 |
R-free | 0.27558 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4z18 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.188 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 70.920 |
High resolution limit [Å] | 2.700 |
Number of reflections | 13282 |
<I/σ(I)> | 10.8 |
Completeness [%] | 99.9 |
Redundancy | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIQUID DIFFUSION | 295 | 0.2 M Ammonium Acetate, 20% PEG 3350 |