5JDK
Crystal structure of the DNA binding domain of Sap1 in fission yeast S.pombe
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U |
| Synchrotron site | SSRF |
| Beamline | BL17U |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-11-05 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97915 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 36.840, 40.880, 70.140 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 17.870 - 0.998 |
| R-factor | 0.1699 |
| Rwork | 0.170 |
| R-free | 0.17860 |
| Structure solution method | SAD |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.911 |
| Data reduction software | HKL-2000 (0.98.691) |
| Data scaling software | CrystalClear (1.44) |
| Phasing software | PHENIX (1.10.1) |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 17.870 | 1.034 |
| High resolution limit [Å] | 0.998 | 0.998 |
| Rmerge | 0.049 | 0.598 |
| Number of reflections | 58240 | |
| <I/σ(I)> | 6.88 | 1.22 |
| Completeness [%] | 99.9 | 98.6 |
| Redundancy | 6.6 | 4.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.8 | 293 | 200mM Trimethylamine N-oxide, 15-22% (w/v) PEG 2000MME |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.8 | 293 | 200mM Trimethylamine N-oxide, 15-22% (w/v) PEG 2000MME |






