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5JD5

Crystal structure of MGS-MilE3, an alpha/beta hydrolase enzyme from the metagenome of pyrene-phenanthrene enrichment culture with sediment sample of Milazzo Harbor, Italy

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-07-16
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths91.668, 97.160, 167.670
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.720 - 1.950
R-factor0.196
Rwork0.195
R-free0.23700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2WIR
RMSD bond length0.006
RMSD bond angle0.993
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.7201.980
High resolution limit [Å]1.9501.950
Rmerge0.0800.574
Number of reflections103264
<I/σ(I)>15.632.16
Completeness [%]94.197.9
Redundancy2.72.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52980.1 M Tris pH 8.5, 0.2 M sodium acetate, 30% (w/v) PEG4K, 1/70 chymotrypsin. Cryoprotectant: paratone-N oil.

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