5JC8
Crystal structure of a putative short-chain dehydrogenase/reductase from Burkholderia xenovorans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-03-03 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97857 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 71.180, 81.080, 86.370 |
Unit cell angles | 90.00, 94.53, 90.00 |
Refinement procedure
Resolution | 38.023 - 1.450 |
R-factor | 0.1413 |
Rwork | 0.141 |
R-free | 0.15760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ni5 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.878 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (dev_2356) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.023 | 1.490 | |
High resolution limit [Å] | 1.450 | 6.480 | 1.450 |
Rmerge | 0.038 | 0.019 | 0.351 |
Number of reflections | 165687 | ||
<I/σ(I)> | 25.1 | 59.94 | 4.45 |
Completeness [%] | 95.8 | 93.7 | 84.8 |
Redundancy | 5.2 | ||
CC(1/2) | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 290 | Rigaku Reagents JCSG+ screen H11: 0.2 M Magnesium Chloride, 0.1 M Bis-Tris pH 5.5, 25% PEG 3350, BuxeA.00010.c.B1 PS02595 at 22.5mg/ml, cryo protected in 80% mother liquor-20% ethylene glycol mix |