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5JC1

Structure of Plasmodium falciparum DXR in complex with a beta-substituted fosmidomycin analogue, LC55 and manganese

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyPIXEL
Collection date2015-02-19
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.87260
Spacegroup nameP 1
Unit cell lengths51.575, 56.459, 85.708
Unit cell angles103.84, 103.25, 100.15
Refinement procedure
Resolution30.000 - 1.650
R-factor0.18068
Rwork0.179
R-free0.20379
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)LC51 pdb code: 5JAZ
RMSD bond length0.008
RMSD bond angle1.234
Data reduction softwareXDS
Data scaling softwareSCALA
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.6801.740
High resolution limit [Å]1.6501.650
Rmerge0.0900.633
Number of reflections103882
<I/σ(I)>91.8
Completeness [%]97.495.9
Redundancy3.53.4
CC(1/2)0.997
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529310% W/V PEG 8000, 20% V/V ethylene glycol, 0.1M MES/imidazole pH6.5 0.02M each monosaccharide, (D-glucose, D-mannose, D-galactose, L-fucose, D-xylose, N-acetyl-D-glucosamine)

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