5JBA
Crystal structure of factor IXa variant V16I K98T Y177T I212V in complex with PPACK
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-30 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.041, 65.718, 96.761 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.370 - 1.400 |
R-factor | 0.1542 |
Rwork | 0.153 |
R-free | 0.17900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wph |
RMSD bond length | 0.016 |
RMSD bond angle | 1.575 |
Data reduction software | iMOSFLM (7.11) |
Data scaling software | Aimless (0.3.11) |
Phasing software | MOLREP (11.2.08) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.370 | 1.450 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.047 | 0.147 |
Number of reflections | 54056 | |
<I/σ(I)> | 21.52 | 3.49 |
Completeness [%] | 96.3 | 90.52 |
Redundancy | 4.7 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 6 mg/mL protein-inhibitor complex, 0.1M MES pH 6.5, 18% PEG6000 |