5J96
Crystal structure of Slow Bee Paralysis Virus at 3.4A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-01 |
Detector | DECTRIS PILATUS3 X 1M |
Wavelength(s) | 0.994 |
Spacegroup name | I 2 3 |
Unit cell lengths | 360.661, 360.661, 360.661 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 70.700 - 3.410 |
Rwork | 0.339 |
R-free | 0.33900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nap |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | GLRF |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.700 | 3.450 |
High resolution limit [Å] | 3.410 | 3.410 |
Rmerge | 1.260 | |
Number of reflections | 92015 | |
<I/σ(I)> | 5.6 | 0.4 |
Completeness [%] | 87.4 | 43.7 |
Redundancy | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294 | NaCitrate pH 6.5, 5% (v/v) PEG-4,000, 0.2M NDSB-2 |