5J8L
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 1-deoxy L-tagatose, using a crystal grown in microgravity
Replaces: 4YVLExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-09 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.580, 126.535, 98.903 |
Unit cell angles | 90.00, 101.45, 90.00 |
Refinement procedure
Resolution | 38.680 - 1.730 |
R-factor | 0.197 |
Rwork | 0.194 |
R-free | 0.21900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qul |
RMSD bond length | 0.005 |
RMSD bond angle | 1.300 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | CNS (1.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 1.760 |
High resolution limit [Å] | 1.730 | 4.700 | 1.730 |
Rmerge | 0.075 | 0.050 | 0.467 |
Number of reflections | 121443 | ||
<I/σ(I)> | 10.2 | 2.2 | |
Completeness [%] | 92.1 | 94.6 | 93.3 |
Redundancy | 2 | 2.2 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIQUID DIFFUSION | 4.6 | 293 | 15 % PEG4000, 0.1 M Sodium acetate |