5J84
Crystal structure of L-arabinonate dehydratase in holo-form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-2 |
Synchrotron site | ESRF |
Beamline | ID14-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-06-15 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.97957 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 106.070, 208.610, 147.090 |
Unit cell angles | 90.00, 90.43, 90.00 |
Refinement procedure
Resolution | 39.889 - 2.400 |
R-factor | 0.155 |
Rwork | 0.156 |
R-free | 0.18530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gp4 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.807 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.500 |
High resolution limit [Å] | 2.400 | 2.400 |
Number of reflections | 246940 | |
<I/σ(I)> | 12.3 | 2 |
Completeness [%] | 99.3 | 99 |
Redundancy | 3.2 | 3.1 |
CC(1/2) | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 4 M Sodium formate, 0.1 M MES pH 7.0 |