Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5J6C

FMN-dependent Nitroreductase (CDR20291_0767) from Clostridium difficile R20291

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2015-07-08
DetectorDECTRIS PILATUS 300K
Wavelength(s)1.54178
Spacegroup nameP 21 21 21
Unit cell lengths67.908, 70.732, 87.882
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.941 - 2.096
R-factor0.1899
Rwork0.186
R-free0.24090
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3m5k
RMSD bond length0.007
RMSD bond angle0.914
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.140
High resolution limit [Å]2.1005.7002.100
Rmerge0.1090.0640.454
Rmeas0.1290.0780.544
Rpim0.0670.0430.295
Total number of observations86479
Number of reflections25340
<I/σ(I)>5.8
Completeness [%]99.39899.4
Redundancy3.433.1
CC(1/2)0.9900.814
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2980.2M di-hydrogen ammonium citrate 20% PEG 3350

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon