5J1F
Structure of the spectrin repeats 5 and 6 of the plakin domain of plectin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR-H |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2010-10-08 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 129.220, 47.760, 106.630 |
Unit cell angles | 90.00, 126.66, 90.00 |
Refinement procedure
Resolution | 43.377 - 3.000 |
R-factor | 0.2464 |
Rwork | 0.245 |
R-free | 0.27720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | D_1000218819 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.563 |
Data reduction software | XDS (January 10, 2014) |
Data scaling software | XSCALE (January 10, 2014) |
Phasing software | PHASER (2.1.4) |
Refinement software | PHENIX ((dev_2000: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.400 | 3.080 |
High resolution limit [Å] | 3.000 | 3.000 |
Rpim | 0.093 | 0.889 |
Number of reflections | 10510 | |
<I/σ(I)> | 15 | 2 |
Completeness [%] | 97.7 | 100 |
Redundancy | 3.9 | 3.9 |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | A protein solution at 30 mg/ml in 10 mM Tris-Hcl (pH 7.5), 50 mM NaCl, 1 mM DTT was mixed with an equal volume of crystallization solution 0.1 M Bis-Tris-Propane (pH 6.0), 18% PEG 3350, 0.2 Na malonate |