5IRL
Crystal structure of rabbit NOD2 SER mutant in an ADP-bound state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-10-10 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 77.900, 107.845, 185.365 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 93.220 - 3.090 |
R-factor | 0.20113 |
Rwork | 0.199 |
R-free | 0.25026 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.368 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 93.220 |
High resolution limit [Å] | 3.090 |
Number of reflections | 27203 |
<I/σ(I)> | 12.7 |
Completeness [%] | 98.8 |
Redundancy | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.8 | 277 | 5% PEG 20000, 5% MPD, 100 mM Hepes pH 7.8, 500 mM NaCl |