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5IJD

The crystal structure of mouse TLR4/MD-2/lipid A complex

Replaces:  5HG6
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-06-17
DetectorADSC QUANTUM 315r
Wavelength(s)0.97918
Spacegroup nameP 1 21 1
Unit cell lengths66.843, 145.737, 136.195
Unit cell angles90.00, 100.67, 90.00
Refinement procedure
Resolution39.340 - 2.700
R-factor0.21727
Rwork0.215
R-free0.28534
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ijd
RMSD bond length0.014
RMSD bond angle1.800
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.750
High resolution limit [Å]2.7002.700
Rmerge0.058
Number of reflections54848
<I/σ(I)>8.3
Completeness [%]96.2
Redundancy4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82930.1 M Tris, pH 8.0, 0.2 M lithium chloride, 14% PEG8000, 2.5% PEG400

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