5IHX
Crystal Structure of a C-terminally truncated Aspergillus nidulans mitochondrial tyrosyl-tRNA synthetase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-06-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97947 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 69.461, 84.950, 164.247 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.020 - 2.298 |
R-factor | 0.1817 |
Rwork | 0.180 |
R-free | 0.21600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ts1 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.720 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.5.0) |
Refinement software | PHENIX (dev_1535) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.298 | 6.240 | 2.300 |
Rmerge | 0.112 | 0.044 | 0.724 |
Number of reflections | 44001 | ||
<I/σ(I)> | 13 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 6.8 | 6.7 | 5.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 295 | 10 mM Tris-HCl pH 8.5, 8% PEG 8000, 1 mM L-tyrosine, 12% glycerol |