5IHD
Calcium(II) and copper(II) bound to the Z-DNA form of d(CGCGCG), complexed by L-lactate and succinate
Replaces: 4XQYExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | Long fine focus |
Temperature [K] | 183 |
Detector technology | IMAGE PLATE |
Collection date | 2005-11-07 |
Detector | STOE |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 27.487, 35.576, 31.044 |
Unit cell angles | 90.00, 107.50, 90.00 |
Refinement procedure
Resolution | 26.215 - 1.570 |
R-factor | 0.162 |
Rwork | 0.161 |
R-free | 0.19000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dcg |
RMSD bond length | 0.007 |
RMSD bond angle | 1.048 |
Data reduction software | X-Area |
Data scaling software | XSCALE |
Phasing software | SHELXS |
Refinement software | PHENIX (dev_1834) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 26.215 | 1.700 |
High resolution limit [Å] | 1.570 | 1.570 |
Rmerge | 0.069 | 0.174 |
Number of reflections | 7934 | |
<I/σ(I)> | 16.51 | 3.77 |
Completeness [%] | 97.9 | 89 |
Redundancy | 6.8 | 2.96 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6 | 296 | 1.2 mM d(CG)3, 1.2 mM di copper complex, 0.25 M MES pH 6, 25 mM Ca(lactate)2, 2.5% EtOAc |