5IFA
Crystal structure of unbound VRC01c-HuGL2 Fab from an HIV-1 naive donor at 1.82 A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2015-04-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97950 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 79.063, 124.201, 47.946 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.837 - 1.821 |
R-factor | 0.2065 |
Rwork | 0.205 |
R-free | 0.24030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jpk |
RMSD bond length | 0.009 |
RMSD bond angle | 1.038 |
Data reduction software | HKL-2000 (v706e) |
Data scaling software | HKL-2000 (v706e) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX ((1.10_2155)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 48.840 |
High resolution limit [Å] | 1.820 |
Number of reflections | 40894 |
<I/σ(I)> | 0.95 |
Completeness [%] | 97.8 |
Redundancy | 4.7 |
CC(1/2) | 0.872 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M lithium sulfate and 20% (w/v) PEG3350, and cryo-protected with 25% glycerol |