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5IDQ

Crystal structure of a Short-chain dehydrogenase/reductase (SDR)from Burkholderia vietnamiensis at 1.55 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2016-02-03
DetectorRAYONIX MX-225
Wavelength(s)0.97856
Spacegroup nameP 1 21 1
Unit cell lengths61.370, 49.270, 66.820
Unit cell angles90.00, 94.71, 90.00
Refinement procedure
Resolution47.010 - 1.550
R-factor0.1742
Rwork0.173
R-free0.20630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1sny
RMSD bond length0.011
RMSD bond angle1.170
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (dev_2289)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.01047.0101.590
High resolution limit [Å]1.5506.9301.550
Rmerge0.0710.0370.529
Number of reflections57605
<I/σ(I)>13.0928.822.97
Completeness [%]99.494.399.2
Redundancy4.53
CC(1/2)0.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5290MCSG1 condition D10: 40% PEG 3350,0.2 M Calcium Acentate, 0.1 M Sodium Cacodylate pH 6.5, BuviA.00010.rB1 at 20.9 mg/ml, 1:1 drop to protein ratio. Direct cryo, plate 269027d10, puck ktx5 position 9

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