5IB7

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin

This is a non-PDB format compatible entry.

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SLS BEAMLINE X06SA
Synchrotron site	SLS
Beamline	X06SA
Temperature [K]	100
Detector technology	PIXEL
Collection date	2015-09-06
Detector	DECTRIS PILATUS 6M
Wavelength(s)	1.00
Spacegroup name	P 21 21 21
Unit cell lengths	209.300, 448.800, 620.200
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	147.082 - 2.990
R-factor	0.2016
Rwork	0.202
R-free	0.24110
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	5e7k
RMSD bond length	0.009
RMSD bond angle	1.581
Data reduction software	XDS
Data scaling software	XSCALE
Phasing software	PHASER
Refinement software	PHENIX

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	147.082		3.070
High resolution limit [Å]	2.990	13.370	2.990
Rmerge	0.344	0.061	4.673
Number of reflections	1162817
<I/σ(I)>	14.73	80.5	1
Completeness [%]	100.0	99.5	100
Redundancy	69.52
CC(1/2)	0.998

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	7.5	293	PEG 20000, PEG 550mme, KSCN, Tris-OAc