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5I62

Crystal structure of the insertion loop deletion mutant of the RNA-dependent RNA polymerase of a human picorbirnavirus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]77
Detector technologyCCD
Collection date2012-03-15
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.12719
Spacegroup nameP 41 21 2
Unit cell lengths77.534, 77.534, 183.858
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.721 - 2.001
R-factor0.1733
Rwork0.172
R-free0.20120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Crystal structure of the RNA-dependent RNA polymerase of a human picorbirnavirus
RMSD bond length0.008
RMSD bond angle0.900
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.030
High resolution limit [Å]2.0005.4302.000
Rmerge0.0900.0450.260
Total number of observations505906
Number of reflections38794
<I/σ(I)>19.6
Completeness [%]99.998.8100
Redundancy1312.612.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293200 mM sodium acetate, 100 mM sodium cacodylate pH 6.5, and 35% PEG 8000

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