5HV0
Structural Analysis of Cofactor Binding of a Prolyl 4-Hydroxylase from the Pathogenic Bacterium Bacillus anthracis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-21 |
Detector | NOIR-1 |
Wavelength(s) | 1.00 |
Spacegroup name | P 3 |
Unit cell lengths | 90.336, 90.336, 51.423 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.117 - 1.630 |
R-factor | 0.1759 |
Rwork | 0.174 |
R-free | 0.21490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3itq |
RMSD bond length | 0.025 |
RMSD bond angle | 0.841 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.117 | 39.117 | 1.720 |
High resolution limit [Å] | 1.630 | 5.150 | 1.630 |
Rmerge | 0.031 | 0.414 | |
Rmeas | 0.071 | ||
Rpim | 0.030 | ||
Total number of observations | 322968 | ||
Number of reflections | 58550 | ||
<I/σ(I)> | 20 | 19.2 | 1.8 |
Completeness [%] | 99.9 | 98.5 | 100 |
Redundancy | 5.5 | 5.4 | 5.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 293 | 0.1 M HEPES pH 7.8, 0.05 M Cadmium sulfate, 0.9 M Sodium acetate tri-hydrate, 0.1 M Ammonium sulfate |