5HUH
Crystal Structure of NadE from Streptococcus pyogenes
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-20 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.521, 93.104, 128.569 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.720 - 2.500 |
R-factor | 0.17449 |
Rwork | 0.172 |
R-free | 0.22593 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hmq |
RMSD bond length | 0.012 |
RMSD bond angle | 1.427 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.123 | 0.454 |
Number of reflections | 19874 | |
<I/σ(I)> | 12.5 | 2.5 |
Completeness [%] | 92.6 | 82.9 |
Redundancy | 6.6 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1 M Tris, 20% PEG 4000, 0.2 M MgCl2 |