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5HQ1

Comment on S. W. M. Tanley and J. R. Helliwell Structural dynamics of cisplatin binding to histidine in a protein Struct. Dyn. 1, 034701 (2014) regarding the refinement of 4mwk, 4mwm, 4mwn and 4oxe and the method we have adopted.

Replaces:  4MWM
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR
Temperature [K]200
Detector technologyCCD
Collection date2012-11-03
DetectorAPEX II CCD
Wavelength(s)1.5418
Spacegroup nameP 1
Unit cell lengths26.777, 31.382, 33.865
Unit cell angles88.90, 72.31, 68.46
Refinement procedure
Resolution32.090 - 1.000
R-factor0.17317
Rwork0.172
R-free0.19699
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4mwm
RMSD bond length0.023
RMSD bond angle1.908
Data reduction softwareSAINT
Data scaling softwareAPEX
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.0901.100
High resolution limit [Å]1.0001.000
Rmerge0.0870.241
Number of reflections47695
<I/σ(I)>5.931.33
Completeness [%]90.879.7
Redundancy2.250.81
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE4.7294CRYSTALLIZATION CONDITIONS: 40MG HEWL CO-CRYSTALLISED WITH 2.6MG CISPLATIN, WITH THE PLATINUM COMPOUNDS BEING IN A 3-FOLD MOLAR EXCESS TO THE PROTEIN. 462.5 UL OF A 0.02M NAAC SOLUTION ALONG WITH 462.5 UL OF A 0.5M NANO3 SOLUTION WAS USED WITH 75 UL DMSO ADDED, BATCH, TEMPERATURE 294K, PH 4.7, EVAPORATION.

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