5HLJ
Crystal Structure of Major Envelope Protein VP24 from White Spot Syndrome Virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-26 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97915 |
Spacegroup name | I 21 3 |
Unit cell lengths | 139.735, 139.735, 139.735 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.246 - 2.406 |
R-factor | 0.173 |
Rwork | 0.171 |
R-free | 0.19260 |
Starting model (for MR) | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.125 |
Data reduction software | SCALEPACK |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 2.440 |
High resolution limit [Å] | 2.400 | 6.510 | 2.400 |
Rmerge | 0.074 | 0.043 | |
Number of reflections | 17758 | ||
<I/σ(I)> | 10.5 | ||
Completeness [%] | 99.9 | 98.8 | 100 |
Redundancy | 20.6 | 18 | 20.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 289 | 0.1M Tris-HCl, pH 8.5, 2.75 M NH4AC |