5HJF
The apo form of Dps4 from Nostoc punctiforme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-12 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.984002 |
Spacegroup name | P 63 |
Unit cell lengths | 101.884, 101.884, 146.250 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.107 - 1.590 |
R-factor | 0.1308 |
Rwork | 0.130 |
R-free | 0.14620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.170 |
Data reduction software | XDS |
Data scaling software | Aimless (0.2.14) |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.750 | 48.750 | 1.640 |
High resolution limit [Å] | 1.590 | 6.150 | 1.590 |
Rmerge | 0.067 | 0.054 | 0.507 |
Total number of observations | 1174206 | 20298 | 113526 |
Number of reflections | 115112 | ||
<I/σ(I)> | 19.6 | 48.4 | 3.8 |
Completeness [%] | 99.7 | 99.8 | 98.5 |
Redundancy | 10.2 | 9.9 | 10.2 |
CC(1/2) | 0.999 | 0.998 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 25% SOKALAN HP 66, 0.1 M HEPES pH 7.0 and 0.2 M NaOAc |