5HGL
Hexameric HIV-1 CA, open conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-03-27 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 89.690, 159.270, 249.399 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.990 - 3.100 |
R-factor | 0.2517 |
Rwork | 0.250 |
R-free | 0.28190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h4e |
RMSD bond length | 0.008 |
RMSD bond angle | 1.166 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.5.14) |
Phasing software | PHASER (2.5.7) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.990 | 19.990 | 3.270 |
High resolution limit [Å] | 3.100 | 9.800 | 3.100 |
Rmerge | 0.094 | 0.069 | 0.552 |
Rpim | 0.065 | 0.048 | 0.411 |
Total number of observations | 89050 | 2681 | 10474 |
Number of reflections | 31869 | ||
<I/σ(I)> | 7.1 | 13.9 | 1.9 |
Completeness [%] | 97.4 | 84.6 | 92 |
Redundancy | 2.8 | 2.9 | 2.4 |
CC(1/2) | 0.986 | 0.976 | 0.651 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | PEG550MME (13-14%), KSCN (0.15M), TRIS (0.1M, pH 8.5) |