Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5HGL

Hexameric HIV-1 CA, open conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2014-03-27
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths89.690, 159.270, 249.399
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.990 - 3.100
R-factor0.2517
Rwork0.250
R-free0.28190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3h4e
RMSD bond length0.008
RMSD bond angle1.166
Data reduction softwareiMOSFLM
Data scaling softwareAimless (0.5.14)
Phasing softwarePHASER (2.5.7)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.99019.9903.270
High resolution limit [Å]3.1009.8003.100
Rmerge0.0940.0690.552
Rpim0.0650.0480.411
Total number of observations89050268110474
Number of reflections31869
<I/σ(I)>7.113.91.9
Completeness [%]97.484.692
Redundancy2.82.92.4
CC(1/2)0.9860.9760.651
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5290PEG550MME (13-14%), KSCN (0.15M), TRIS (0.1M, pH 8.5)

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon