5HEY
The third PDZ domain from the synaptic protein PSD-95 (G330T mutant) in complex with a C-terminal peptide derived from CRIPT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97929 |
Spacegroup name | P 41 3 2 |
Unit cell lengths | 90.230, 90.230, 90.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.533 - 1.500 |
R-factor | 0.1754 |
Rwork | 0.172 |
R-free | 0.20260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1be9 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.843 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10pre_2104) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.533 | 1.538 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.110 | |
Number of reflections | 20266 | |
<I/σ(I)> | 30.057 | |
Completeness [%] | 98.0 | 78 |
Redundancy | 21.9 | 14.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289 | Peptide was included in protein buffer to a final molar ratio of 2:1 relative to protein. Reservoir solution contained 1.2 M sodium citrate, pH 7.0. Equal amounts (1.5 microliters) of protein (8 mg/mL) and reservoir solution were mixed and equillibrated against 500 microliters of crystallization buffer. |