5H9M
Crystal structure of siah2 SBD domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-19 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97929 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.624, 68.753, 102.884 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.010 - 1.761 |
R-factor | 0.17885 |
Rwork | 0.178 |
R-free | 0.22677 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4c9z |
RMSD bond length | 0.010 |
RMSD bond angle | 1.506 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.010 | 50.000 | 1.790 |
High resolution limit [Å] | 1.760 | 4.780 | 1.760 |
Rmerge | 0.101 | 0.048 | 0.879 |
Rmeas | 0.106 | 0.051 | 0.954 |
Rpim | 0.034 | 0.017 | 0.363 |
Total number of observations | 352371 | ||
Number of reflections | 38381 | ||
<I/σ(I)> | 7.2 | ||
Completeness [%] | 100.0 | 99.8 | 99.9 |
Redundancy | 9.2 | 8.8 | 6.5 |
CC(1/2) | 0.999 | 0.720 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 25% PEG8000, 0.2 M NaCl, 0.1 M Hepes pH7.5 |