5H6O
Porphobilinogen deaminase from Vibrio Cholerae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 94.230, 94.230, 165.340 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.125 - 2.702 |
R-factor | 0.2382 |
Rwork | 0.236 |
R-free | 0.27660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gtk |
RMSD bond length | 0.002 |
RMSD bond angle | 0.680 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 47.570 |
High resolution limit [Å] | 2.700 |
Number of reflections | 10562 |
<I/σ(I)> | 38.82 |
Completeness [%] | 99.9 |
Redundancy | 14.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% (w/v) PEG 3350, 100 mM Magnesium Nitrate |