5H2Z
Crystal structure of Human Dihydroorotate Dehydrogenase (DHODH) with 7GF
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-05 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.987 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 90.875, 90.875, 123.170 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.400 - 1.580 |
R-factor | 0.17113 |
Rwork | 0.170 |
R-free | 0.18567 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jtu |
RMSD bond length | 0.031 |
RMSD bond angle | 2.857 |
Data scaling software | HKL-3000 |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.090 | 1.780 |
High resolution limit [Å] | 1.580 | 1.580 |
Number of reflections | 76164 | |
<I/σ(I)> | 4 | |
Completeness [%] | 99.9 | 99.4 |
Redundancy | 16.3 | |
CC(1/2) | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 293 | 0.1M acetate, 40mM C11DAO, 20.8mM N,N-dimethyldecylamine-N-oxide (DDAO), 2mM DHO, 1.6-1.8 M ammonium sulfate |