5H1V
Complex structure of TRIM24 PHD-bromodomain and inhibitor 6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.028, 36.027, 113.207 |
Unit cell angles | 90.00, 96.88, 90.00 |
Refinement procedure
Resolution | 37.464 - 2.002 |
R-factor | 0.1825 |
Rwork | 0.180 |
R-free | 0.22030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5h1t |
RMSD bond length | 0.006 |
RMSD bond angle | 0.757 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.079 | 0.053 | 0.397 |
Rmeas | 0.090 | 0.060 | 0.447 |
Rpim | 0.041 | 0.027 | 0.202 |
Total number of observations | 126161 | ||
Number of reflections | 27040 | ||
<I/σ(I)> | 6.5 | ||
Completeness [%] | 98.6 | 98.6 | 98.6 |
Redundancy | 4.7 | 4.6 | 4.7 |
CC(1/2) | 0.997 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M HEPES sodium, 2%(v/v) Polyethylene glycol 400, 2.0 M Ammonium sulfate |