5H1J
Crystal structure of WD40 repeat domains of Gemin5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-21 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9786 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 60.258, 123.592, 61.732 |
Unit cell angles | 90.00, 119.27, 90.00 |
Refinement procedure
Resolution | 40.599 - 2.000 |
R-factor | 0.1586 |
Rwork | 0.157 |
R-free | 0.19880 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.911 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.116 | 0.066 | 0.504 |
Number of reflections | 53257 | ||
<I/σ(I)> | 4.6 | ||
Completeness [%] | 99.9 | 99.9 | 99.8 |
Redundancy | 4.8 | 4.9 | 4.8 |
CC(1/2) | 0.993 | 0.784 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289 | 0.1M Sodium malonate (pH 7.0), 12% polyethylene glycol (PEG) 3350 |