5GY3
The crystal structure of endoglucanase Cel10, a family 8 glycosyl hydrolase from Klebsiella pneumoniae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.570, 73.256, 79.200 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.245 - 1.770 |
R-factor | 0.1646 |
Rwork | 0.163 |
R-free | 0.19520 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.805 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.800 |
High resolution limit [Å] | 1.770 | 4.800 | 1.770 |
Rmerge | 0.081 | 0.055 | 0.208 |
Rmeas | 0.092 | 0.063 | 0.236 |
Rpim | 0.043 | 0.029 | 0.108 |
Total number of observations | 130639 | ||
Number of reflections | 30441 | ||
<I/σ(I)> | 18.2 | ||
Completeness [%] | 98.1 | 88.9 | 99.9 |
Redundancy | 4.3 | 4.3 | 4.4 |
CC(1/2) | 0.994 | 0.954 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 293 | 0.1M Glycine, pH 9, 30% PEG 8000, 0.5M KCl |