5GRY
Crystal structure of disulfide-bonded diabody
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2013-10-16 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.016, 114.049, 128.474 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.716 - 1.639 |
R-factor | 0.1991 |
Rwork | 0.198 |
R-free | 0.23100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gs1 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.893 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.660 |
High resolution limit [Å] | 1.600 | 1.600 |
Number of reflections | 68771 | |
<I/σ(I)> | 34.5 | |
Completeness [%] | 99.6 | |
Redundancy | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 3.5 | 296 | 0.1 M Citric acid pH 3.5, 1.0 M Sodium chloride, 30% 2-methyl-2,4-pentanediol |