5GJP
Crystal structure of SrLDC in complex with PLP and Cadaverine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-10 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 111.734, 111.734, 112.976 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 2.500 |
R-factor | 0.2003 |
Rwork | 0.198 |
R-free | 0.27860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gjn |
RMSD bond length | 0.012 |
RMSD bond angle | 1.636 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.132 | 0.093 | 0.317 |
Number of reflections | 14439 | ||
<I/σ(I)> | 27.8 | ||
Completeness [%] | 96.8 | 89.5 | 95.1 |
Redundancy | 24.2 | 27.3 | 12.9 |
CC(1/2) | 0.995 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.2 | 293 | PEG 200, Sodium phosphate, NaCl |