5GJ3
Periplasmic heme-binding protein RhuT from Roseiflexus sp. RS-1 in two-heme bound form (holo-2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-15 |
Detector | RAYONIX MX225-HS |
Wavelength(s) | 1.00 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 67.326, 86.338, 118.806 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.210 - 2.000 |
R-factor | 0.1892 |
Rwork | 0.187 |
R-free | 0.22430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3md9 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.831 |
Data scaling software | HKL-2000 |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 5.430 | 2.000 |
Rmerge | 0.114 | 0.050 | 0.544 |
Number of reflections | 23911 | ||
<I/σ(I)> | 8.1 | ||
Completeness [%] | 99.8 | 99.8 | 97.8 |
Redundancy | 7.9 | 7.6 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6 | 293 | 5% PEG 8000, 0.1 M zinc acetate, and 50 mM MES |