5G52
Crystallographic structure of full particle of Deformed Wing Virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | I 2 3 |
Unit cell lengths | 360.131, 360.131, 360.131 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.805 - 3.802 |
R-factor | 0.2849 |
Rwork | 0.283 |
R-free | 0.32240 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.466 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE: 1.9_1692)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.800 | 3.910 |
High resolution limit [Å] | 3.800 | 3.800 |
Rmerge | 0.370 | 0.800 |
Number of reflections | 56889 | |
<I/σ(I)> | 2 | 0.9 |
Completeness [%] | 75.7 | 76.1 |
Redundancy | 1.8 | 1.78 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | PROTEIN WAS CRYSTALLIZED FROM 0.8 M POTASSIUM DIHYDROGEN PHOSPHATE, 0.8 M SODIUM DIHYDROGEN PHOSPHATE, 0.1 M SODIUM HEPES, 7.5 PH |