5FYA
Cubic crystal of the native PlpD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-12-08 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 21 3 |
Unit cell lengths | 145.906, 145.906, 145.906 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.635 - 2.141 |
R-factor | 0.2013 |
Rwork | 0.199 |
R-free | 0.22690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5fqu |
RMSD bond length | 0.004 |
RMSD bond angle | 0.787 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.640 | 2.270 |
High resolution limit [Å] | 2.140 | 2.140 |
Number of reflections | 54378 | |
<I/σ(I)> | 61.6 | 3 |
Completeness [%] | 95.3 | 85.4 |
Redundancy | 5.9 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 1.4 M MAGNESIUM SULFATE, 0.1M BIS-TRIS PROPANE PH 7.0 |