5FH1
The structure of rat cytosolic PEPCK variant E89D in complex with GTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-04 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97949 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.523, 119.119, 60.894 |
Unit cell angles | 90.00, 107.66, 90.00 |
Refinement procedure
Resolution | 59.560 - 1.550 |
R-factor | 0.1852 |
Rwork | 0.183 |
R-free | 0.21810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2qey |
RMSD bond length | 0.011 |
RMSD bond angle | 1.532 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 1.580 |
High resolution limit [Å] | 1.550 | 4.210 | 1.550 |
Rmerge | 0.061 | 0.033 | 0.362 |
Total number of observations | 628907 | ||
Number of reflections | 84925 | ||
<I/σ(I)> | 14.8 | ||
Completeness [%] | 94.7 | 99 | 61.9 |
Redundancy | 7.4 | 7.6 | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 298 | 25% PEG 3350, 0.1M HEPES PH 7.4, 8MM MNCL2, 10mM GTP |