5FDK
Crystal structure of RecU(D88N) in complex with palindromic DNA duplex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2008-12-16 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | H 3 2 |
Unit cell lengths | 144.447, 144.447, 310.343 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.694 - 3.208 |
R-factor | 0.2597 |
Rwork | 0.256 |
R-free | 0.32860 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.657 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER (2.5.3) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 116.024 | 48.694 | 3.380 |
High resolution limit [Å] | 3.208 | 10.140 | 3.210 |
Rmerge | 0.091 | 0.033 | 1.415 |
Rmeas | 0.100 | ||
Rpim | 0.030 | 0.012 | 0.440 |
Total number of observations | 229929 | 6557 | 33396 |
Number of reflections | 20730 | ||
<I/σ(I)> | 16.7 | 54.8 | 1.8 |
Completeness [%] | 99.8 | 96 | 99.4 |
Redundancy | 11.1 | 9.5 | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 290 | 0.1 M BICINE pH 9, 10% PEG 6000 |