5FBF
S1 nuclease from Aspergillus oryzae in complex with two molecules of 2'-deoxycytidine-5'-monophosphate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.1 |
| Synchrotron site | BESSY |
| Beamline | 14.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-04-03 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.91842 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 53.742, 62.388, 62.762 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 44.250 - 1.040 |
| R-factor | 0.11315 |
| Rwork | 0.111 |
| R-free | 0.13509 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | our previous model of S1 |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.695 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 44.250 | 1.060 |
| High resolution limit [Å] | 1.040 | 1.040 |
| Rmerge | 0.089 | 0.307 |
| Number of reflections | 96234 | |
| <I/σ(I)> | 10.7 | 2.7 |
| Completeness [%] | 94.5 | 54.5 |
| Redundancy | 6 | 2.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 3.8 | 291 | 0.1 M Citric acid pH 3.8, 25% w/v Polyethylene glycol 3,350 |
