5FA3
Structure of HLA-A2:01 with peptide G9V
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-22 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.12 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.201, 79.259, 57.397 |
Unit cell angles | 90.00, 115.98, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.860 |
R-factor | 0.21116 |
Rwork | 0.210 |
R-free | 0.23491 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5mre |
RMSD bond length | 0.006 |
RMSD bond angle | 1.109 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.890 |
High resolution limit [Å] | 1.860 | 1.860 |
Rmerge | 0.311 | |
Number of reflections | 37513 | |
<I/σ(I)> | 20.3 | 4.6 |
Completeness [%] | 98.8 | 97.5 |
Redundancy | 3.7 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 30% PEG 4000, 0.1M Tris-HCl pH 8.0, 0.2 M lithium sulfate |