5F4M
Protruding domain of GII.17 norovirus Kawasaki323
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2015-08-12 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.54179 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 121.510, 121.510, 156.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.606 - 2.270 |
R-factor | 0.1608 |
Rwork | 0.159 |
R-free | 0.18680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | homology model based on 4OOS |
RMSD bond length | 0.007 |
RMSD bond angle | 1.081 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.610 | 2.300 | |
High resolution limit [Å] | 2.240 | 10.030 | 2.240 |
Rmerge | 0.156 | 0.054 | 0.879 |
Rmeas | 0.176 | 0.061 | 1.001 |
Total number of observations | 495136 | ||
Number of reflections | 106195 | 1060 | 6893 |
<I/σ(I)> | 7.76 | 21.37 | 1.7 |
Completeness [%] | 98.8 | 86.5 | 86.4 |
Redundancy | 8.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | Magnesium Chloride, PEG8000, Tris-HCl |