5F1S
Crystal structure of the teleost fish polymeric Ig receptor (pIgR) ectodomain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-07-19 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 54.938, 54.938, 187.257 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.037 - 1.749 |
R-factor | 0.1881 |
Rwork | 0.185 |
R-free | 0.21480 |
Structure solution method | SAD |
RMSD bond length | 0.014 |
RMSD bond angle | 1.216 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | SHELXDE |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.040 | 1.810 |
High resolution limit [Å] | 1.749 | 1.749 |
Rmerge | 0.054 | 1.050 |
Number of reflections | 30034 | |
<I/σ(I)> | 18.17 | 1.9 |
Completeness [%] | 99.8 | 98.95 |
Redundancy | 7.7 | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | 75mM MES monohydrate pH 6.5, 9% w/v PEG 20,000, 25mM phenol |