5F1L
Crystal structure of the bromodomain of BRD9 in complex with compound 9.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-03-08 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 70.308, 125.165, 30.016 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.880 - 2.300 |
R-factor | 0.1926 |
Rwork | 0.192 |
R-free | 0.20870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hme |
RMSD bond length | 0.009 |
RMSD bond angle | 0.920 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Refinement software | BUSTER-TNT (BUSTER 2.11.5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 125.170 | 125.170 | 2.540 |
High resolution limit [Å] | 2.270 | 5.080 | 2.270 |
Rmerge | 0.046 | 0.021 | 1.134 |
Rpim | 0.020 | 0.009 | 0.474 |
Total number of observations | 79569 | 7396 | 22814 |
Number of reflections | 12714 | ||
<I/σ(I)> | 24.7 | 66.7 | 3.2 |
Completeness [%] | 98.9 | 99.5 | 98.3 |
Redundancy | 6.3 | 5.9 | 6.5 |
CC(1/2) | 0.999 | 0.999 | 0.955 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.3 | 277 | glycerol ethoxylate, Tris |